ivy.nexus module¶

class ivy.nexus.Newick(parse_results=None, ttable={})[source]¶

Bases: object

convenience class for storing the results of a newick tree record from a nexus file, as parsed by newick.nexus_iter

parse()[source]¶

populate(parse_results, ttable={})[source]¶

ivy.nexus.fetchaln(fname)[source]¶: Fetch alignment

ivy.nexus.parse_treesblock(infile)[source]¶

ivy.nexus.split_blocks(infile)[source]¶